Microarray Analysis - The Basics

← Back to document page

Microarray AnalysisThe BasicsThomas GirkeDecember 9, 2011Microarray AnalysisSlide 1/42TechnologyChallengesData AnalysisData DepositoriesR and BioConductorHomework AssignmentMicroarray AnalysisSlide 2/42OutlineTechnologyChallengesData AnalysisData DepositoriesR and BioConductorHomework AssignmentMicroarray AnalysisTechnologySlide 3/42Microarray and Chip TechnologyDefinitionHybridization-based technique that allows simultaneousanalysis of thousands of samples on a solid ProfilingGene copy numberResequencingGenotypingSingle-nucle otide polymorphismDNA-protein interaction ( : ChIP-on-chip)Gene discovery ( : Tiling arrays)Identification of new cell technologiesProtein arraysCompound arraysMicroarray AnalysisTechnologySlide 4/42Why Microarrays?

Access to fast growing number of analysis packages Is standard for data mining and biostatistical analysis Technical advantages: free, open-source, available for all OSs Books & Documentation simpleR - Using R for Introductory Statistics(Gentleman et al., 2005) Bioinformatics and Computational Biology Solutions Using R and Bioconductor(John ...

  Analysis, Basics, Access, Microarray, Microarray analysis the basics