Bioinformatics Group - Thesis projects

Bioinformatics Group - Thesis projectsLast updated: April 30th, 2021 Reconstructing symbiont strains from long-read metagenomicsAnnotation and analysis of the blue shark (Prionaceglauca) genomeThe evolution of auxiliary metabolic genes in bacteriophagesBiG-SCAPE updates to a successful software forlarge-scale genome miningGene content variation mediated by recombination inbacteriophage evolutionInferring viral recombination from metagenomesMachine learning to predict enzyme regioselectivityStrategic genome mining for novel antimicrobial compoundsMining microbiomes for novel peptidic natural productsA novel metabolite annotation approach combining LC-MSand LC-MS/MS dataLatent space models to link metabolite structuresand MS spectraMS2 ChemClass: automated mass spectral-based chemicalclass annotationElemental Formula and Mass Difference-enhanced SubstructureDiscovery in MetabolomicsProfilesTracing Drug and Food Substructures & their Biotransformationsin UrineToward Natural Products aware Chemical FingerprintsLocal assembly of QTL regions in plantsUsing machine learning to predict underlying factorsfor plant meiotic recombination ratevariationExplaining functional properties of non-domain proteinsequence regionsMatrix factorizati

Requirements Programming in Python, Advanced Bioinformatics Skills Genomics, Programming Timestamp September 25, 2018 De s c r i p ti o n Tomato ( S o l a n u m l yco p e rsi cu m ) is one of the most important vegetable plants in the world. Because of its importance as food, tomato has been bred to improve yield, quality, and ...

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