Transcription of Package ‘Seurat’ - cran.r-project.org
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Package ‘Seurat’ - cran.r-project.org
Package Seurat'. October 3, 2019. Version Date 2019-09-23. Title Tools for Single Cell Genomics Description A toolkit for quality control, analysis, and exploration of single cell RNA sequenc- ing data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity from sin- gle cell transcriptomic measurements, and to integrate diverse types of sin- gle cell data. See Satija R, Farrell J, Gennert D, et al (2015) < >, Ma- cosko E, Basu A, Satija R, et al (2015) < >, and But- ler A and Satija R (2017) < > for more details. URL , BugReports Additional_repositories Depends R (>= ), methods, Imports ape, cluster, cowplot, fitdistrplus, future, , ggplot2 (>= ), ggrepel, ggridges, graphics, grDevices, grid, httr, ica, igraph, irlba, KernSmooth, leiden (>= ), lmtest, MASS, Matrix (>= ), metap, pbapply, plotly, png, RANN, RColorBrewer, Rcpp, RcppAnnoy, reticulate, rlang, ROCR, rsvd, Rtsne, scales, sctransform (>= ), SDMT ools, stats, tools, tsne, utils, uwot LinkingTo Rcpp (>= ), RcppEigen, RcppProgress License GPL-3 |
Package ‘Seurat’ October 3, 2019 Version 3.1.1 Date 2019-09-23 Title Tools for Single Cell Genomics Description A toolkit for quality control, analysis, and exploration of single cell RNA sequenc-
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