Transcription of Package ‘spider’ - The Comprehensive R Archive Network
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Package ‘spider’ - The Comprehensive R Archive Network
Package spider February 16, 2018 TypePackageTitleSpecies Identity and Evolution in Brown, Rupert Collins, Stephane Boyer, Marie-Caroline Lefort, Jagoba Malumbres-Olarte, Cor Vink, Rob CruickshankMaintainerRupert A. of species limits and DNA barcoding data. Included are functions for generat-ing important summary statistics from DNA barcode data, assessing specimen identification effi-cacy, testing and optimizing divergence threshold limits, assessment of diagnostic nu-cleotides, and calculation of the probability of reciprocal monophyly. Additionally, a slid-ing window function offers opportunities to analyse information across a gene, of-ten used for marker design in degraded DNA studies. Further information on the pack-age has been published in Brown et al (2012) < >.
Spider: SPecies IDentity and Evolution in R, is an R package implementing a number of useful analyses for DNA barcoding studies and associated research into species delimitation and specia- tion.
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