Transcription of PyMOL User's Guide
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PyMOL User's Guide
PyMOL User's Guidewritten byWarren L. DeLano, assistance fromSarina Bromberg, 2004 DeLano Scientific LLCAll Rights of ContentsCopyright Notice and Usage of Usage for the PyMOL User's PyMOL ?..2 Words of to PyMOL !..4Is PyMOL Free Software?..4 Yes, DeLano Scientific System Free Dependent you use you do not use and Free Based Started with Mouse the a command 's Viewer External GUI PDB the Mouse Trackball Clipping the Origin of of ContentsGetting Started with Your Work (Optional)..18 Loading Objects and Objects and Selections On and Changing Your Point of Your and Log Line Completion using Completion using Other Typed Commands and Syntax and Atom Atom word Selection Python from within and Structure Stereo of ContentsStereoGenerating Stereo and Commands To Ray traced Movie Mouse Atoms and Usage of the "pk" Atom "lb" and "rb" Density and Graphics Objects (CGOs) and Molscript Compiled Graphics Objects and
Cross−Platform. A single code base supports both Unix, Macintosh, and Windows, using OpenGL and Python and a small set of Open−source external dependencies. • • Command−Line and GUI Control Real world applications require both. • Atom Selections. Arbitrary logical expressions facilitate focused visualization and editing. Molecular ...
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