Quick Start Guide 2 Computational Anatomy Toolbox - …

ManualComputational Anatomy Toolbox - cat12 Quick Start Guide2 Version Information4 Introduction and Overview10 Getting Started10 Download and Installation10 Starting the Toolbox11 Basic VBM Analysis (Overview)11 Overview of cat12 Processing14 cat12 Major Processing Steps14 cat12 Processing Steps in Detail15 Basic VBM Analysis (detailed description)17 Preprocessing Data17 First Module: Segment Data17 Second Module: Display slices (optionally)18 Third Module: Estimate Total Intracranial Volume (TIV)19 Fourth Module: Check sample19 Fifth Module: Smooth21 Building the Statistical Model22 Two-sample T-Test23 Full Factorial Model (for a 2x2 Anova)24 Multiple Regression (Linear)25 Multiple Regression (Polynomial)26 Full Factorial Model (Interaction)27 Full Factorial Model (Polynomial Interaction)28 Estimating the Statistical Model291 Checking for Design Orthogonality29 Defining Contrasts31 Special Cases36 cat12 for longitudinal data36 Optional Change of Parameters for Preprocessing39 Preprocessing of Longitudinal Data39 Longitudinal Data in One Group40 Longitudinal Data in Two Groups42 Longitudinal Data in Two Groups with interaction of covariate by group44 Adapting the cat12 workflow for populations such as children48 Customized Tissue Probability Maps48 Customized Dartel- or Shooting-template49 Other variants of Computational morphometry53 Deformation-based morphometry (DBM)53 Surface-based morphometry (SBM)54 Region of interest (ROI) analysis57 Additional

Computational Anatomy Toolbox - CAT12 Quick Start Guide 2 Version Information 4 Introduction and Overview 10 Getting Started 10 Download and Installation 10 Starting the Toolbox 11 Basic VBM Analysis (Overview) 11 Overview of CAT12 Processing 14 CAT12 Major Processing Steps 14 CAT12 Processing Steps in Detail 15 Basic VBM Analysis (detailed ...

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  Computational, Anatomy, Toolbox, Computational anatomy toolbox, Cat12, Computational anatomy toolbox cat12

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