MCMCTree tutorials - Ziheng Yang

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rectory. On my Windows computer, the tutorial files were copied into C:\Users\Mario\Tutorial\run01. Go into this new directory (cd C:\Users\Mario\Tutorial\run01) and, on the command line (terminal window), type 3. mcmctree mcmctree.ctl The MCMC program will start. It will read the alignment, tree and control files and it will first

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