Transcription of igraph: Network Analysis and Visualization
1 Package igraph September 29, Analysis and VisualizationAuthorSee AUTHORS s for simple graphs and Network Analysis . It canhandle large graphs very well and provides functions for generating randomand regular graphs, graph Visualization , centrality methods and much , grDevices, magrittr, Matrix, pkgconfig (>= ),rlang, stats, utilsSuggestsape, graph, igraphdata, rgl, scales, stats4, tcltk, testthat,withr, digestLicenseGPL (>= 2) , (optional), libxml2 (optional), glpk (>= ,optional), C++11 ' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' '' ' ' ' ' ' ' ' ' '' ' ' ' ' ' ' ' ' '' ' ' ' ' ' ' ' ' ' ' '' ' ' ' ' ' ' ' ' ' ' '' ' ' ' ' '' ' ' ' ' ' ' ' ' '' ' ' ' ' ' ' ' ' '12 Rtopics 07:10:02 UTCR topics documented.
2 Igraph-package .. 12[.igraph .. 12[[.igraph .. 15%>% .. 16+.igraph .. 17add_edges .. 19add_layout_ .. 20add_vertices .. 20adjacent_vertices .. 21all_simple_paths .. 22alpha_centrality .. 23are_adjacent .. 24arpack_defaults .. 25articulation_points .. 33as_adj_list .. 34as_adjacency_matrix .. 35as_data_frame .. 36as_edgelist .. 38as_graphnel .. 39as_ids .. 40as_incidence_matrix .. 41as_long_data_frame .. 42as_membership .. 42assortativity .. 43authority_score .. 45automorphism_group .. 46automorphisms .. 47bfs .. 49biconnected_components .. 51bipartite_mapping .. 52bipartite_projection .. 56canonical_permutation.]]]
3 56categorical_pal .. 58centr_betw .. 59centr_betw_tmax .. 60centr_clo .. 61centr_clo_tmax .. 62 Rtopics documented:3centr_degree .. 62centr_degree_tmax .. 63centr_eigen .. 64centr_eigen_tmax .. 65centralize .. 66cliques .. 68closeness .. 69cluster_edge_betweenness .. 71cluster_fast_greedy .. 73cluster_fluid_communities .. 74cluster_infomap .. 75cluster_label_prop .. 77cluster_leading_eigen .. 78cluster_leiden .. 80cluster_louvain .. 82cluster_optimal .. 84cluster_spinglass .. 85cluster_walktrap .. 88cocitation .. 89cohesive_blocks .. 90compare .. 94complementer .. 95component_distribution .. 96component_wise.
4 98compose .. 98connect .. 99consensus_tree .. 101console .. 102constraint .. 103contract .. 104convex_hull .. 105coreness .. 105count_isomorphisms .. 106count_motifs .. 107count_subgraph_isomorphisms .. 108count_triangles .. 109curve_multiple .. 111decompose .. 112degree .. 113delete_edge_attr .. 114delete_edges .. 114delete_graph_attr .. 115delete_vertex_attr .. 116delete_vertices .. 117dfs .. 117diameter .. 120difference .. 123dim_select .. 124disjoint_union .. 1254 Rtopics documented:distance_table .. 126diverging_pal .. 130diversity .. 131dominator_tree .. 132dot-data .. 133 Drawing graphs .. 134dyad_census .. 140E .. 141each_edge .. 142eccentricity.
5 143edge .. 144edge_attr .. 145edge_attr_names .. 146edge_attr<- .. 146edge_connectivity .. 147edge_density .. 149eigen_centrality .. 150embed_adjacency_matrix .. 152embed_laplacian_matrix .. 153ends .. 156estimate_betweenness .. 157feedback_arc_set .. 159fit_hrg .. 160fit_power_law .. 164girth .. 165global_efficiency .. 166gorder .. 168graph_ .. 169graph_attr .. 169graph_attr_names .. 170graph_attr<- .. 170graph_from_adj_list .. 171graph_from_adjacency_matrix .. 172graph_from_atlas .. 175graph_from_edgelist .. 176graph_from_graphdb .. 177graph_from_graphnel .. 178graph_from_incidence_matrix .. 180graph_from_isomorphism_class .. 181graph_from_lcf .. 182graph_from_literal.
6 183graph_id .. 185graph_version .. 186graphlet_basis .. 186greedy_vertex_coloring .. 188groups .. 189gsize .. 190harmonic_centrality .. 191has_eulerian_path .. 192head_of .. 193 Rtopics documented:5head_print .. 194hrg .. 194hrg-methods .. 195hrg_tree .. 195hub_score .. 196identical_graphs .. 197igraph-attribute-combination .. 198igraph-dollar .. 200igraph-es-attributes .. 200igraph-es-indexing .. 202igraph-es-indexing2 .. 204igraph-minus .. 205igraph-vs-attributes .. 206igraph-vs-indexing .. 207igraph-vs-indexing2 .. 210igraph_demo .. 211igraph_options .. 212igraph_test .. 214igraph_version .. 214incident .. 215incident_edges .. 216indent_print .. 216intersection.
7 219is_bipartite .. 220is_chordal .. 221is_dag .. 222is_degseq .. 223is_directed .. 224is_graphical .. 225is_igraph .. 226is_matching .. 226is_min_separator .. 228is_named .. 229is_printer_callback .. 230is_separator .. 231is_tree .. 231is_weighted .. 232isomorphic .. 233isomorphism_class .. 235isomorphisms .. 236ivs .. 236keeping_degseq .. 238knn .. 239laplacian_matrix .. 243layout_ .. 2436 Rtopics documented:layout_as_bipartite .. 245layout_as_star .. 246layout_as_tree .. 247layout_in_circle .. 249layout_nicely .. 250layout_on_grid .. 251layout_on_sphere .. 252layout_randomly .. 253layout_with_dh .. 254layout_with_drl .. 256layout_with_fr .. 259layout_with_gem.
8 261layout_with_graphopt .. 262layout_with_kk .. 264layout_with_lgl .. 266layout_with_mds .. 267layout_with_sugiyama .. 268local_scan .. 272make_ .. 274make_chordal_ring .. 275make_clusters .. 276make_de_bruijn_graph .. 276make_empty_graph .. 277make_from_prufer .. 278make_full_bipartite_graph .. 279make_full_citation_graph .. 280make_full_graph .. 281make_graph .. 281make_kautz_graph .. 285make_lattice .. 286make_line_graph .. 287make_ring .. 288make_star .. 288make_tree .. 289match_vertices .. 290max_cardinality .. 291max_flow .. 292membership .. 294merge_coords .. 298min_cut .. 299min_separators .. 301min_st_separators .. 303motifs .. 305mst .. 306neighbors.
9 307norm_coords .. 308normalize .. 309page_rank .. 309path .. 311permute .. 312 Pie charts as vertices .. 313 Rtopics .. 316plot_dendrogram .. 319power_centrality .. 321predict_edges .. 331printer_callback .. 334printr .. 335r_pal .. 335radius .. 336random_walk .. 337read_graph .. 338realize_degseq .. 339reciprocity .. 343reverse_edges .. 344rewire .. 344rglplot .. 345running_mean .. 346sample_ .. 346sample_bipartite .. 347sample_correlated_gnp .. 348sample_correlated_gnp_pair .. 350sample_degseq .. 351sample_dirichlet .. 352sample_dot_product .. 353sample_fitness .. 354sample_fitness_pl .. 356sample_forestfire .. 357sample_gnm .. 359sample_gnp .. 360sample_grg.
10 361sample_growing .. 362sample_hierarchical_sbm .. 363sample_hrg .. 364sample_islands .. 364sample_k_regular .. 365sample_last_cit .. 366sample_motifs .. 367sample_pa .. 368sample_pa_age .. 370sample_pref .. 373sample_sbm .. 374sample_seq .. 3768 Rtopics documented:sample_smallworld .. 377sample_spanning_tree .. 378sample_sphere_surface .. 379sample_sphere_volume .. 380sample_traits_callaway .. 381sample_tree .. 382scan_stat .. 383scg .. 384scg-method .. 388scg_eps .. 389scg_group .. 390scg_semi_proj .. 392sequential_pal .. 394set_edge_attr .. 395set_graph_attr .. 396set_vertex_attr .. 396shapes .. 397similarity .. 400simplified .. 401simplify .. 402spectrum .. 403split_join_distance.
