Basic Image Processing with FIJI/ImageJ

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Basic Image Processing with FIJI/ImageJ . Kristopher Kubow, , james madison university CONTENTS (CLICK TO JUMP TO SECTION). 1 No matter what you are doing, READ THIS FIRST ........................................ ........................................ .. 1. 2 Downloading FIJI/ImageJ ........................................ ........................................ ....................................... 2. 3 Getting started ........................................ ........................................ ........................................ ............... 2. 4 Improving intensity visualization ........................................ ........................................ ........................... 3. 5 Working with multi-dimensional images opened as hyperstacks ........................................ ................. 4. 6 Shading correction.

Basic Image Processing with FIJI/ImageJ Kristopher Kubow, Ph.D., James Madison University ... • Navigation through menus and sub-menus is notated using >. For example, ^Image > Type _ tells you to go to access the Image menu and then the Type sub-menu.

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