Transcription of LigandScout User Manual
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LigandScout User Manual
LigandScout User ManualLigandScout User ManualiiiTable of Contents1. Introduction to LigandScout .. What's New in LigandScout .. Installing and Starting LigandScout .. Visual Semantics .. LigandScout Graphical User Interface .. 92. File Handling, Data Management and Networking .. Importing and Exporting Files .. Retrieving PDB Complexes Online .. Local and Shared Repository .. Handling the Repository .. Sessions .. Handling Sessions .. Networking .. iworker .. Network Monitor .. 213. LigandScout Perspectives .. Basic User Interface Modules .. 3D View .. 2D View .. 3D Widgets .. Hierarchy View .. Library View.
Chemical features always refer to the ligand side, but take the macromolecule geometry into account in many cases (e.g. hydrogen bond vectors, where the vector target points to the macromolecule counterpart).
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