Transcription of limma Linear Models for Microarray and RNA-Seq Data …
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limma Linear Models for Microarray and RNA-Seq Data …
limma : Linear Models for Microarray and RNA-Seq DataUser s GuideGordon K. Smyth, Matthew Ritchie, Natalie Thorne,James Wettenhall, Wei Shi and Yifang HuBioinformatics Division, The Walter and Eliza Hall Instituteof Medical Research, Melbourne, AustraliaFirst edition 2 December 2002 Last revised 14 November 2021 This free open-source software implements academic researchby the authors and co-workers. If you use it, please supportthe project by citing the appropriate journal articles listed inSection Introduction52 Citinglimma.. Installation .. How to get help ..93 Quick A brief introduction to R .. SamplelimmaSession .. Data Objects .. 134 Reading Microarray Scope of this Chapter .. Recommended Files .. The Targets Frame.
The above article describes the theory behind the duplicateCorrelation function. If you use limma for normalization of two-color microarray data, please cite one of: Smyth, G. K., and Speed, T. P. (2003). Normalization of cDNA microarray data. Methods 31, 265{273., and,
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