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Rsubread/Subread Users Guide - Bioconductor

Rsubread/Subread Users GuideRsubread October 2021 Wei Shi and Yang LiaoOlivia Newton-John Cancer Research InstituteMelbourne, AustraliaCopyright 2011 - 2021 Contents1 Introduction32 Citation .. Download and installation .. BioconductorRsubreadpackage .. SourceForgeSubreadpackage .. How to get help ..73 The seed-and-vote mapping Seed-and-vote .. Detection of short indels .. Detection of exon-exon junctions .. Detection of structural variants (SVs) .. Two-scan read alignment .. Multi-mapping reads .. Mapping of paired-end reads.

tiple Linux variants including Debian, Ubuntu, Fedora and Cent OS. To install Subread package on FreeBSD or Solaris, you will have to install from source. Install from source on a Unix or Macintosh computer

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