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Documentation for structure software: Version 2

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Documentation forstructuresoftware: Version K. PritchardaXiaoquan WenaDaniel Falushb123aDepartment of Human GeneticsUniversity of ChicagobDepartment of StatisticsUniversity of OxfordSoftware 2, 20101Our other colleagues in thestructureproject are Peter Donnelly, Matthew Stephens and Melissa first Version of this program was developed while the authors (JP, MS, PD) were in the Departmentof Statistics, University of and questions aboutstructureshould be addressed to the online forum Please check this document and search the previous discus-sion before posting Overview . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . What s new in Version .

autosomal data are input together. There are two alternative representations for the phase information: (1) the two rows of data for an individual are assumed to correspond to the paternal and maternal contributions, respectively. The phase line indicates the probability

  Structure, Autosomal

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