Practical course using the software ||||| Introduction …

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Practical course using thesoftware Introduction to genetic data analysis inThibaut Jombart AbstractThis Practical course is meant as a short Introduction to genetic dataanalysis using [10]. After describing the main types of data, we illus-trate how to perform some basic population genetics analyses, and then gothrough constructing trees from genetic distances and performing standardmultivariate analyses. The Practical uses mostly the packagesadegenet[6],ape[9] andade4[1, 3, 2], but others likegenetics[11] andhierfstat[5] arealso Let s Loading the packages . . . . . . . . . . . . . . . . . . . . . . . How to get information? . . . . . . . . . . . . . . . . . . . . .32 Handling the Data formats . . . . . . . . . . . . . . . . . . . . . . . . . . . Importing / exporting data.

trate how to perform some basic population genetics analyses, and then go through constructing trees from genetic distances and performing standard multivariate analyses.

  Introduction, Software, Genetic