Rsubread/Subread Users Guide - Bioconductor

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Rsubread/Subread Users GuideRsubread October 2021Wei Shi and Yang LiaoOlivia Newton-John Cancer Research InstituteMelbourne, AustraliaCopyright 2011 - 2021Contents1 Introduction32 Citation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Download and installation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . BioconductorRsubreadpackage . . . . . . . . . . . . . . . . . . SourceForgeSubreadpackage . . . . . . . . . . . . . . . . . . . . How to get help . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .73 The seed-and-vote mapping Seed-and-vote.

The Subread/Rsubread packages comprise a suite of high-performance software programs for processing next-generation sequencing data. Included in these packages are Subread aligner, Subjunc aligner, Sublong long-read aligner, Subindel long indel detection program,

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